Acetobacter pomorum DM001

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Acetobacter

Description

Acetobacter pomorum DM001 is a bacterium characterized by the presence of flagella, which contributes to its motility. This trait is significant as it allows the organism to navigate its environment, aiding in its survival and potential interactions with its surroundings. The organism possesses a single replicon, which indicates its genetic structure is organized in a streamlined manner. This can have implications for its replication and stability, potentially facilitating efficient cellular processes. The genetic sequence of Acetobacter pomorum DM001 is cataloged under the accession number AEUP00000000.1. This accession provides a reference for researchers interested in studying the genetic makeup and functionality of this specific strain. From a biological perspective, Acetobacter pomorum DM001 is part of a broader ecological community where its motility may allow it to exploit various niches, particularly in environments rich in organic materials. Its ability to move towards resources could enhance its role in biogeochemical cycles, particularly in the fermentation processes where it may contribute to the production of acetic acid. Thus, understanding the traits of Acetobacter pomorum DM001 may provide insights into its ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusAcetobacter
SpeciesAcetobacter pomorum
StrainDM001

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetobacter pomorum DM001 Contig00240, whole genome shotgun

Gene Summary

Adenine Count

683586 bp

Thymine Count

691055 bp

Guanine Count

757614 bp

Cytosine Count

751161 bp

Genome Length

2883421 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAPO_1393Not AvailablePositive1580942 - 15811186009.2
putative transporter yebqAPO_1394Not AvailablePositive1581149 - 158254047973.6
glutamate-cysteine ligaseAPO_1395Not AvailableNegative1582576 - 158398552221.2
ribosomal rna small subunit methyltransferase eAPO_1396Not AvailableNegative1584055 - 158482828068.8
4-hydroxybenzoate octaprenyltransferaseAPO_1397Not AvailablePositive1584937 - 158585432842.2
outer membrane lipoprotein carrier protein lolaAPO_1398Not AvailablePositive1585861 - 158655625001.0
replication-associated recombination protein aAPO_1399Not AvailablePositive1586661 - 158802249830.6
ribosomal large subunit pseudouridine synthase cAPO_1400Not AvailablePositive1588039 - 158902536013.6
hypothetical proteinAPO_1401Not AvailablePositive1589058 - 159121174963.7
atp12 atpaseAPO_1402Not AvailablePositive1591208 - 159197527675.2

Displaying genes 1401 – 1410 of 2455 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.