Acetobacter pomorum DM001

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Acetobacter

Description

Acetobacter pomorum DM001 is a bacterium characterized by the presence of flagella, which contributes to its motility. This trait is significant as it allows the organism to navigate its environment, aiding in its survival and potential interactions with its surroundings. The organism possesses a single replicon, which indicates its genetic structure is organized in a streamlined manner. This can have implications for its replication and stability, potentially facilitating efficient cellular processes. The genetic sequence of Acetobacter pomorum DM001 is cataloged under the accession number AEUP00000000.1. This accession provides a reference for researchers interested in studying the genetic makeup and functionality of this specific strain. From a biological perspective, Acetobacter pomorum DM001 is part of a broader ecological community where its motility may allow it to exploit various niches, particularly in environments rich in organic materials. Its ability to move towards resources could enhance its role in biogeochemical cycles, particularly in the fermentation processes where it may contribute to the production of acetic acid. Thus, understanding the traits of Acetobacter pomorum DM001 may provide insights into its ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusAcetobacter
SpeciesAcetobacter pomorum
StrainDM001

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetobacter pomorum DM001 Contig00240, whole genome shotgun

Gene Summary

Adenine Count

683586 bp

Thymine Count

691055 bp

Guanine Count

757614 bp

Cytosine Count

751161 bp

Genome Length

2883421 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative o-sialoglycoprotein endopeptidaseAPO_1129Not AvailablePositive1280080 - 128120139196.4
hypothetical proteinAPO_1130Not AvailablePositive1281198 - 128201930661.9
upf0056 membrane protein yvbgAPO_1131Not AvailableNegative1282034 - 128277125687.9
hypothetical proteinAPO_1132Not AvailableNegative1282829 - 128491675901.9
lysyl-trna synthetaseAPO_1133Not AvailableNegative1284937 - 128656260021.2
hypothetical proteinAPO_1134Not AvailablePositive1286523 - 128747635230.3
acetyl-coenzyme a carboxylase carboxyl transferase subunit alphaAPO_1135Not AvailableNegative1287532 - 128848834952.2
tyrosine recombinase xerdAPO_1136Not AvailableNegative1288563 - 128948333299.4
3-dehydroquinate synthaseAPO_1137Not AvailablePositive1289831 - 129162164424.4
outer membrane proteinAPO_1138Not AvailablePositive1291966 - 129309639808.5

Displaying genes 1141 – 1150 of 2455 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.