Acetobacter pomorum DM001

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Acetobacter

Description

Acetobacter pomorum DM001 is a bacterium characterized by the presence of flagella, which contributes to its motility. This trait is significant as it allows the organism to navigate its environment, aiding in its survival and potential interactions with its surroundings. The organism possesses a single replicon, which indicates its genetic structure is organized in a streamlined manner. This can have implications for its replication and stability, potentially facilitating efficient cellular processes. The genetic sequence of Acetobacter pomorum DM001 is cataloged under the accession number AEUP00000000.1. This accession provides a reference for researchers interested in studying the genetic makeup and functionality of this specific strain. From a biological perspective, Acetobacter pomorum DM001 is part of a broader ecological community where its motility may allow it to exploit various niches, particularly in environments rich in organic materials. Its ability to move towards resources could enhance its role in biogeochemical cycles, particularly in the fermentation processes where it may contribute to the production of acetic acid. Thus, understanding the traits of Acetobacter pomorum DM001 may provide insights into its ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusAcetobacter
SpeciesAcetobacter pomorum
StrainDM001

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetobacter pomorum DM001 Contig00240, whole genome shotgun

Gene Summary

Adenine Count

683586 bp

Thymine Count

691055 bp

Guanine Count

757614 bp

Cytosine Count

751161 bp

Genome Length

2883421 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c-type biogenesis protein ccmeAPO_1036Not AvailablePositive1173909 - 117443919019.8
cytochrome c-type biogenesis protein ccmfAPO_1037Not AvailablePositive1174476 - 117646171091.9
cytochrome c biogenesis thiol:disulfide interchange protein ccmgAPO_1038Not AvailablePositive1176458 - 117703921223.7
cytochrome c-type biogenesis protein ccmhAPO_1039Not AvailablePositive1177036 - 117752718124.2
cytochrome c-type biogenesis protein cychAPO_1040Not AvailablePositive1177524 - 117825526199.3
hypothetical proteinAPO_1041Not AvailableNegative1178283 - 117881019662.5
hypothetical proteinAPO_1042Not AvailableNegative1178884 - 117925812973.5
putative transporterAPO_1043Not AvailablePositive1179498 - 118168479973.5
putative transporterAPO_1044Not AvailablePositive1181796 - 118400080314.9
k+ channel inward rectifier domain-containing proteinAPO_1045Not AvailableNegative1184008 - 118494934630.1

Displaying genes 1051 – 1060 of 2455 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.