Shigella boydii ATCC 9905

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii ATCC 9905 is a Gram-negative, rod-shaped bacterium that is part of the genus Shigella. This organism is characterized by its single replicon, indicating a streamlined genetic structure typical of certain bacterial species. Notably, Shigella boydii possesses flagella, which are tail-like structures that enable motility. This feature may play a role in its ability to navigate through various environments, although Shigella species are primarily known for their pathogenicity rather than motility. The strain is cataloged under the accession number AERN00000000.1, which provides a reference for its genomic information and facilitates research and identification. Shigella boydii is one of the four species of Shigella, which are known to cause shigellosis, a significant public health concern characterized by diarrhea, fever, and abdominal cramps. Understanding the traits of Shigella boydii ATCC 9905 is crucial for microbiological research and public health monitoring. Its Gram-negative nature and motility may influence its interaction with host organisms and its ability to spread in environments conducive to human infection. The presence of a single replicon suggests that it may have a stable genetic composition, which could affect its adaptability and virulence. Overall, insights into the characteristics of this bacterium are vital for developing strategies to combat infections and enhance food safety practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella genomosp. SF-2015
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shigella boydii ATCC 9905
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shigella boydii ATCC 9905 SGB.Contig217_1, whole genome shotgun

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1267095 bp

Guanine Count

1300284 bp

Cytosine Count

1298404 bp

Genome Length

5129830 bp

Protein-coding Genes

4810 genes

Non-Coding Genes

438 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose dehydrogenaseSGB_04954Not AvailablePositive4759170 - 476033643688.4
chain length determinant proteinSGB_04955Not AvailablePositive4760481 - 476146136347.9
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp pyrophosphatase proteinSGB_04956Not AvailableNegative4761649 - 476226022805.2
imidazole glycerol phosphate synthase cyclase subunitSGB_04957Not AvailableNegative4762254 - 476303028451.1
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseSGB_04958Not AvailableNegative4763012 - 476374926098.3
imidazole glycerol phosphate synthase amidotransferase subunitSGB_04959Not AvailableNegative4763749 - 476433921654.1
imidazole glycerol-phosphate dehydratase/histidinol phosphataseSGB_04960Not AvailableNegative4764339 - 476540640246.3
histidinol-phosphate aminotransferaseSGB_04961Not AvailableNegative4765406 - 476647639392.4
histidinol dehydrogenaseSGB_04962Not AvailableNegative4766473 - 476777746189.0
atp phosphoribosyltransferaseSGB_04963Not AvailableNegative4767783 - 476868233368.8

Displaying genes 4881 – 4890 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.