Shigella boydii ATCC 9905

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii ATCC 9905 is a Gram-negative, rod-shaped bacterium that is part of the genus Shigella. This organism is characterized by its single replicon, indicating a streamlined genetic structure typical of certain bacterial species. Notably, Shigella boydii possesses flagella, which are tail-like structures that enable motility. This feature may play a role in its ability to navigate through various environments, although Shigella species are primarily known for their pathogenicity rather than motility. The strain is cataloged under the accession number AERN00000000.1, which provides a reference for its genomic information and facilitates research and identification. Shigella boydii is one of the four species of Shigella, which are known to cause shigellosis, a significant public health concern characterized by diarrhea, fever, and abdominal cramps. Understanding the traits of Shigella boydii ATCC 9905 is crucial for microbiological research and public health monitoring. Its Gram-negative nature and motility may influence its interaction with host organisms and its ability to spread in environments conducive to human infection. The presence of a single replicon suggests that it may have a stable genetic composition, which could affect its adaptability and virulence. Overall, insights into the characteristics of this bacterium are vital for developing strategies to combat infections and enhance food safety practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella genomosp. SF-2015
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shigella boydii ATCC 9905
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shigella boydii ATCC 9905 SGB.Contig217_1, whole genome shotgun

Gene Summary

Adenine Count

1264047 bp

Thymine Count

1267095 bp

Guanine Count

1300284 bp

Cytosine Count

1298404 bp

Genome Length

5129830 bp

Protein-coding Genes

4810 genes

Non-Coding Genes

438 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrite transporter nircSGB_04883Not AvailableNegative4684890 - 468569628592.2
hypothetical proteinSGB_04885Not AvailableNegative4688950 - 469013143110.9
peptidyl-prolyl cis-trans isomerase ppia precursorSGB_04886Not AvailablePositive4690402 - 469097420432.5
cell filamentation protein ficSGB_04887Not AvailablePositive4691236 - 469183823090.5
para-aminobenzoate synthase, amidotransferase componentSGB_04888Not AvailablePositive4691870 - 469243320715.0
bifunctional n-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase proteinSGB_04889Not AvailablePositive4692519 - 469373943769.5
hypothetical proteinSGB_04890Not AvailableNegative4693806 - 469583377140.7
cyclic amp receptor proteinSGB_04891Not AvailableNegative4695946 - 469657823641.9
osmc/ohr family proteinSGB_04892Not AvailablePositive4696880 - 469728414517.6
phosphoribulokinaseSGB_04893Not AvailableNegative4697339 - 469820832364.9

Displaying genes 4811 – 4820 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.