Vibrio caribbeanicus ATCC BAA-2122 VIBC2010_99

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio caribbeanicus ATCC BAA-2122, designated as VIBC2010_99, is a bacterium that primarily inhabits gravel and the water column. This ecological niche suggests its adaptability to both sedimentary and pelagic environments, which may influence its interactions within aquatic ecosystems. The organism is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in resource utilization and adaptability in various habitats. The genomic information for V. caribbeanicus is accessible under the accession number AEIU00000000.1, which provides a basis for genomic studies that can further elucidate its metabolic capabilities and potential ecological roles. Understanding the habitat preferences and genomic characteristics of V. caribbeanicus can offer insights into its ecological functions, such as nutrient cycling and interactions with other microorganisms. Its presence in gravel and the water column suggests it may play a role in both sediment stabilization and water quality, highlighting its significance in maintaining ecological balance in coastal and marine environments. Further research could explore its specific contributions to biodiversity and ecosystem health in the habitats it occupies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio caribbeanicus
StrainATCC BAA-2122 VIBC2010_99

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio caribbeanicus ATCC BAA-2122 VIBC2010_99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgravel; water column
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio caribbeanicus ATCC BAA-2122 VIBC2010_99, whole genome

Gene Summary

Adenine Count

1278010 bp

Thymine Count

1295762 bp

Guanine Count

927055 bp

Cytosine Count

909709 bp

Genome Length

4410536 bp

Protein-coding Genes

4023 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator pdhrVIBC2010_01733Not AvailablePositive2965765 - 296653529073.8
pyruvate dehydrogenase subunit e1VIBC2010_01738Not AvailablePositive2966593 - 296926299814.8
dihydrolipoamide acetyltransferaseVIBC2010_01743Not AvailablePositive2969282 - 297117165631.3
dihydrolipoamide dehydrogenaseVIBC2010_01748Not AvailablePositive2971426 - 297285350785.4
smcr-like protein vvprVIBC2010_01753Not AvailableNegative2972946 - 297355723749.4
hypoxanthine phosphoribosyltransferaseVIBC2010_01758Not AvailablePositive2973886 - 297441319943.0
carbonic anhydraseVIBC2010_01763Not AvailableNegative2974466 - 297513424913.7
abc transporter, atp-binding proteinVIBC2010_01768Not AvailablePositive2975341 - 297625834707.3
putative permeaseVIBC2010_01773Not AvailablePositive2976265 - 297703528247.3
pantoate--beta-alanine ligaseVIBC2010_01778Not AvailableNegative2977230 - 297812032919.6

Displaying genes 2771 – 2780 of 4084 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.