Dermacoccus sp. Ellin185

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Dermacoccus

Description

Dermacoccus sp. Ellin185 is characterized by having a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number AEIQ00000000.1, which serves as a reference for further studies about this particular strain. While specific phenotypic traits, habitat preferences, and ecological roles of Dermacoccus sp. Ellin185 are not provided, the presence of a single replicon suggests a degree of genomic simplicity that may confer advantages in certain environments. Bacterial species with fewer replicons often exhibit efficient replication and resource utilization, which can be beneficial in competitive ecological niches. In summary, Dermacoccus sp. Ellin185, with its single replicon and designated accession number, highlights a unique genomic organization that may play a role in its adaptability and survival in various ecological settings. Further research could elucidate its specific ecological interactions and applications in microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusDermacoccus
SpeciesDermacoccus sp. Ellin185
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermacoccus sp. Ellin185 contig_604, whole genome shotgun

Gene Summary

Adenine Count

483860 bp

Thymine Count

483132 bp

Guanine Count

1071075 bp

Cytosine Count

1077271 bp

Genome Length

3115364 bp

Protein-coding Genes

2919 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter, substrate-binding protein, family 5HMPREF0321_1432Not AvailableNegative496864 - 49862463429.4
abc transporter, permease proteinHMPREF0321_1433P94312Negative498695 - 49970235449.6
recombination factor protein raraHMPREF0321_1434P9WQN0Negative499937 - 50131048340.4
hypothetical proteinHMPREF0321_1435Not AvailablePositive501393 - 50197720369.9
hypothetical proteinHMPREF0321_1436O88022Positive501974 - 50425979597.8
had hydrolase, family ia, variant 3HMPREF0321_1437Not AvailableNegative504316 - 50490921367.4
aspartate--trna ligaseHMPREF0321_1438A1SJB8Negative505053 - 50708073843.3
hypothetical proteinHMPREF0321_1439Q9AD90Negative507173 - 50760716011.8
asparaginaseHMPREF0321_1440P50286Positive507682 - 50866233648.3
hydrolase, nudix familyHMPREF0321_1441I6X235Negative508667 - 50934124720.0

Displaying genes 481 – 490 of 2975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

237 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 237 metabolites

Health Effects

No health effects information available for this bacterium.