Afipia sp. 1NLS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia sp. 1NLS2 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which suggests a potential for motility. It possesses a single replicon, indicating a streamlined genomic structure that may influence its replication and adaptability. The accession number for Afipia sp. 1NLS2 is ADVZ00000000.1, which provides a reference for further genetic and genomic studies. Based on its traits, Afipia sp. 1NLS2 may play a role in various ecological niches, potentially contributing to microbial diversity and interactions within its environment. The presence of flagella could facilitate its movement towards nutrients or away from unfavorable conditions, enhancing its survival and ecological interactions. The Gram-negative nature of this bacterium is significant, as it typically indicates a complex cell wall structure that may confer resistance to certain antibiotics and influence its ecological relationships. In summary, Afipia sp. 1NLS2 exhibits traits typical of motile, Gram-negative bacteria, with implications for its ecological roles and potential interactions in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia sp. 1NLS2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia sp. 1NLS2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia sp. 1NLS2 ctg00003, whole genome shotgun sequence.

Gene Summary

Adenine Count

769968 bp

Thymine Count

767149 bp

Guanine Count

1216555 bp

Cytosine Count

1218084 bp

Genome Length

3971756 bp

Protein-coding Genes

3804 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat shock protein hsp20AfiDRAFT_0474Not AvailablePositive478429 - 47889316890.8
rna polymerase, sigma-24 subunit, ecf subfamilyAfiDRAFT_0475Not AvailableNegative478955 - 47982731351.6
alkylhydroperoxidase like protein, ahpd familyAfiDRAFT_0476Not AvailablePositive479934 - 48039216931.3
conserved hypothetical proteinAfiDRAFT_0477Not AvailableNegative480435 - 48123227855.4
glutamate synthase (ferredoxin)AfiDRAFT_0478Not AvailablePositive481712 - 486481174277.0
glutamate synthase, nadh/nadph, small subunitAfiDRAFT_0479Not AvailablePositive486613 - 48807052730.1
protein of unknown function duf1236AfiDRAFT_0480Not AvailableNegative488139 - 48852513305.2
protein of unknown function duf459AfiDRAFT_0481Not AvailableNegative488714 - 49027956078.4
lytic murein transglycosylaseAfiDRAFT_0482Not AvailableNegative490442 - 49180049213.5
utp-glucose-1-phosphate uridylyltransferaseAfiDRAFT_0483Not AvailablePositive492064 - 49293632009.8

Displaying genes 511 – 520 of 3877 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.