Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | HMPREF0220_0835 | Not Available | Negative | 879278 - 880759 | 56584.9 |
| proline--trna ligase | HMPREF0220_0836 | Not Available | Negative | 881203 - 882735 | 58774.4 |
| proline--trna ligase | HMPREF0220_0837 | Not Available | Negative | 882770 - 884485 | 64494.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HMPREF0220_0838 | Not Available | Negative | 884851 - 885336 | 17462.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF0220_0839 | Not Available | Negative | 885333 - 886079 | 28573.4 |
| lipoyltransferase and lipoate-protein ligase | HMPREF0220_0840 | Not Available | Negative | 886321 - 887253 | 36640.0 |
| putative l-ribulose-5-phosphate 4-epimerase | HMPREF0220_0841 | Not Available | Negative | 887429 - 888079 | 23435.1 |
| hypothetical protein | HMPREF0220_0842 | Not Available | Negative | 888242 - 888715 | 19146.6 |
| pts system, galactitol-specific iic component | HMPREF0220_0843 | Not Available | Negative | 888750 - 890114 | 48131.2 |
| pts system, lactose/cellobiose specific iib subunit | HMPREF0220_0844 | Not Available | Negative | 890176 - 890478 | 10650.4 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
