Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, large subunit | HMPREF0220_0725 | Not Available | Positive | 775342 - 776619 | 45858.4 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF0220_0726 | Not Available | Positive | 776619 - 777125 | 18628.4 |
| 3-isopropylmalate dehydrogenase | HMPREF0220_0727 | Not Available | Positive | 777132 - 778202 | 39358.4 |
| thioesterase family protein | HMPREF0220_0728 | Not Available | Positive | 778565 - 779080 | 19116.8 |
| aminotransferase, class v | HMPREF0220_0729 | Not Available | Positive | 779453 - 780529 | 40014.1 |
| 4-phosphoerythronate dehydrogenase | HMPREF0220_0730 | Not Available | Positive | 780769 - 781710 | 34653.1 |
| hypothetical protein | HMPREF0220_0731 | Not Available | Positive | 781742 - 782992 | 48595.0 |
| hypothetical protein | HMPREF0220_0732 | Not Available | Positive | 783208 - 783537 | 13466.0 |
| pas domain s-box protein | HMPREF0220_0733 | Not Available | Positive | 783807 - 787355 | 136508.0 |
| putative radical sam protein ygiq | HMPREF0220_0734 | Not Available | Positive | 787540 - 789474 | 73974.6 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
