Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase, glgd subunit | HMPREF0220_0695 | Not Available | Positive | 738227 - 739357 | 42806.1 |
| glycogen/starch synthase, adp-glucose type | HMPREF0220_0696 | Not Available | Positive | 739386 - 740828 | 55499.5 |
| phosphorylase, glycogen/starch/alpha-glucan family | HMPREF0220_0697 | Not Available | Positive | 740821 - 743262 | 93763.6 |
| alpha amylase, catalytic domain protein | HMPREF0220_0698 | Not Available | Positive | 743267 - 745132 | 72756.9 |
| transcriptional regulator, gntr family | HMPREF0220_0699 | Not Available | Positive | 745363 - 746016 | 25274.3 |
| orn/lys/arg decarboxylase, major domain protein | HMPREF0220_0700 | Not Available | Positive | 746633 - 748144 | 56016.3 |
| s-adenosylmethionine decarboxylase proenzyme | HMPREF0220_0701 | Not Available | Positive | 748231 - 748644 | 15659.6 |
| spermidine synthase | HMPREF0220_0702 | Not Available | Positive | 748674 - 749525 | 33020.5 |
| agmatinase | HMPREF0220_0703 | Not Available | Positive | 749515 - 750393 | 33363.6 |
| cold shock protein cspd | HMPREF0220_0704 | Not Available | Negative | 750573 - 750773 | 7452.61 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
