Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, family 3 | HMPREF0220_0565 | Not Available | Positive | 605945 - 606760 | 29507.7 |
| abc transporter, permease protein | HMPREF0220_0566 | Not Available | Positive | 606773 - 607465 | 25103.4 |
| abc transporter, atp-binding protein | HMPREF0220_0567 | Not Available | Positive | 607524 - 608246 | 26571.7 |
| aminotransferase, class v | HMPREF0220_0568 | Not Available | Positive | 608893 - 610044 | 42639.4 |
| thiamine biosynthesis/trna modification protein thii | HMPREF0220_0569 | Not Available | Positive | 610090 - 611265 | 44368.9 |
| prepilin-type cleavage/methylation n-terminal domain protein | HMPREF0220_0570 | Not Available | Positive | 611386 - 612204 | 30265.1 |
| nitroreductase family protein | HMPREF0220_0571 | Not Available | Positive | 612447 - 613088 | 23699.3 |
| pyruvate formate-lyase 1-activating enzyme | HMPREF0220_0572 | Not Available | Negative | 613487 - 614221 | 27573.1 |
| formate c-acetyltransferase | HMPREF0220_0573 | Not Available | Negative | 614381 - 616612 | 83566.4 |
| k+-dependent na+/ca+ exchanger family protein | HMPREF0220_0574 | Not Available | Positive | 616905 - 617966 | 38693.2 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
