Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | HMPREF0220_3749 | Not Available | Positive | 4000860 - 4001366 | 18987.1 |
| glutamate racemase | HMPREF0220_3750 | Not Available | Positive | 4001568 - 4002374 | 29895.5 |
| hypothetical protein | HMPREF0220_3751 | Not Available | Positive | 4002391 - 4002819 | 16413.8 |
| trna(ile)-lysidine synthetase | HMPREF0220_3752 | Not Available | Positive | 4003002 - 4004390 | 53558.2 |
| atp-dependent metallopeptidase hflb | HMPREF0220_3753 | Not Available | Positive | 4004400 - 4006394 | 74022.1 |
| biotin--[acetyl-coa-carboxylase] ligase | HMPREF0220_3754 | Not Available | Positive | 4006708 - 4007685 | 36759.5 |
| peptidase family t4 | HMPREF0220_3755 | Not Available | Positive | 4007678 - 4008637 | 33476.4 |
| hypothetical protein | HMPREF0220_3756 | Not Available | Positive | 4008804 - 4009421 | 21344.4 |
| pantothenate kinase, type iii | HMPREF0220_3757 | Not Available | Positive | 4009440 - 4010210 | 27986.1 |
| tim-barrel protein, nifr3 family | HMPREF0220_3758 | Not Available | Positive | 4010347 - 4011315 | 36196.9 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
