Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | HMPREF0220_0336 | Not Available | Negative | 332582 - 333826 | 46119.0 |
| sigma-54 interaction domain protein | HMPREF0220_0337 | Not Available | Negative | 333869 - 336703 | 107001.0 |
| hypothetical protein | HMPREF0220_0338 | Not Available | Positive | 337380 - 338177 | 28816.5 |
| hypothetical protein | HMPREF0220_0339 | Not Available | Positive | 338178 - 338672 | 18290.9 |
| transporter gate domain protein | HMPREF0220_0340 | Not Available | Positive | 338896 - 340074 | 41677.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF0220_0341 | Not Available | Positive | 340330 - 341937 | 60803.7 |
| response regulator receiver domain protein | HMPREF0220_0342 | Not Available | Positive | 341928 - 342632 | 26600.1 |
| hypothetical protein | HMPREF0220_0343 | Not Available | Negative | 342797 - 342916 | 4423.51 |
| hypothetical protein | HMPREF0220_0344 | Not Available | Negative | 342921 - 343115 | 7146.22 |
| diguanylate cyclase (ggdef) domain protein | HMPREF0220_0345 | Not Available | Positive | 343784 - 346882 | 120245.0 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
