Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin-associated integral membrane protein | HMPREF0220_3679 | Not Available | Positive | 3934566 - 3936734 | 83186.5 |
| putative bacteriocin export abc transporter, lactococcin 972 group | HMPREF0220_3680 | Not Available | Positive | 3936739 - 3937356 | 23279.3 |
| putative alkylphosphonate utilization operon protein phna | HMPREF0220_3681 | Not Available | Positive | 3937545 - 3937889 | 12379.8 |
| pentapeptide repeat protein | HMPREF0220_3682 | Not Available | Positive | 3938446 - 3939327 | 33049.4 |
| hypothetical protein | HMPREF0220_3683 | Not Available | Positive | 3939440 - 3939844 | 15562.0 |
| acetyltransferase, gnat family | HMPREF0220_3684 | Not Available | Positive | 3940020 - 3940469 | 17247.1 |
| hypothetical protein | HMPREF0220_3685 | Not Available | Negative | 3940626 - 3941003 | 13724.4 |
| hypothetical protein | HMPREF0220_3686 | Not Available | Positive | 3941265 - 3942182 | 35384.8 |
| trka c-terminal domain protein | HMPREF0220_3687 | Not Available | Positive | 3942665 - 3944083 | 51512.8 |
| transcriptional regulator, effector binding domain protein | HMPREF0220_3688 | Not Available | Positive | 3944159 - 3944971 | 31692.3 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
