Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF0220_3543 | Not Available | Positive | 3798739 - 3799296 | 21812.1 |
| dtdp-glucose 4,6-dehydratase | HMPREF0220_3544 | Not Available | Positive | 3799334 - 3800317 | 37584.7 |
| transglycosylase slt domain protein | HMPREF0220_3545 | Not Available | Positive | 3800355 - 3801023 | 24752.4 |
| hypothetical protein | HMPREF0220_3546 | Not Available | Positive | 3801032 - 3801460 | 16473.8 |
| putative flagellar motor switch protein flin | HMPREF0220_3547 | Not Available | Positive | 3801484 - 3801798 | 11765.9 |
| flagellar biosynthesis anti-sigma factor flgm | HMPREF0220_3548 | Not Available | Positive | 3801950 - 3802225 | 10335.6 |
| hypothetical protein | HMPREF0220_3549 | Not Available | Positive | 3802230 - 3802646 | 16286.9 |
| flagellar hook-associated protein flgk | HMPREF0220_3550 | Not Available | Positive | 3802664 - 3803974 | 48145.6 |
| flagellar hook-associated protein 3 | HMPREF0220_3551 | Not Available | Positive | 3803993 - 3804925 | 34210.3 |
| protein fliw | HMPREF0220_3552 | Not Available | Positive | 3804942 - 3805334 | 14862.0 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
