Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated cxxc_cxxc protein cst1 | HMPREF0220_3206 | Not Available | Positive | 3413294 - 3415144 | 72538.9 |
| crispr-associated regulatory protein, devr family | HMPREF0220_3207 | Not Available | Positive | 3415101 - 3416060 | 36794.3 |
| crispr-associated protein cas5, tneap subtype | HMPREF0220_3208 | Not Available | Positive | 3416062 - 3416763 | 27278.4 |
| crispr-associated helicase cas3 | HMPREF0220_3209 | Not Available | Positive | 3416774 - 3419095 | 89781.3 |
| crispr-associated protein cas4 | HMPREF0220_3210 | Not Available | Positive | 3419110 - 3419661 | 21997.1 |
| crispr-associated endonuclease cas1, hmari/tneap subtype | HMPREF0220_3211 | Not Available | Positive | 3419664 - 3420644 | 39274.3 |
| crispr-associated protein cas2 | HMPREF0220_3212 | Not Available | Positive | 3420647 - 3420913 | 10471.7 |
| hypothetical protein | HMPREF0220_3213 | Not Available | Positive | 3421057 - 3421176 | 4683.89 |
| hypothetical protein | HMPREF0220_3214 | Not Available | Positive | 3421310 - 3421564 | 9815.32 |
| hypothetical protein | HMPREF0220_3215 | Not Available | Positive | 3422027 - 3422273 | 9855.38 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
