Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthetase family | HMPREF0220_3186 | Not Available | Positive | 3391750 - 3392643 | 33792.7 |
| hypothetical protein | HMPREF0220_3187 | Not Available | Positive | 3392755 - 3392879 | 4456.22 |
| periplasmic binding protein | HMPREF0220_3188 | Not Available | Positive | 3393080 - 3394219 | 42453.7 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF0220_3189 | Not Available | Positive | 3394291 - 3395316 | 37181.4 |
| abc transporter, atp-binding protein | HMPREF0220_3190 | Not Available | Positive | 3395319 - 3396515 | 44567.0 |
| pentapeptide repeat protein | HMPREF0220_3191 | Not Available | Negative | 3396725 - 3397450 | 27516.5 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF0220_3192 | Not Available | Positive | 3397928 - 3400027 | 79668.2 |
| ribonucleoside-diphosphate reductase, beta subunit | HMPREF0220_3193 | Not Available | Positive | 3400040 - 3401011 | 37531.7 |
| hypothetical protein | HMPREF0220_3194 | Not Available | Positive | 3401058 - 3401714 | 25629.2 |
| hypothetical protein | HMPREF0220_3195 | Not Available | Positive | 3402099 - 3402728 | 24420.5 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
