Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein, phzf family | HMPREF0220_3156 | Not Available | Negative | 3358808 - 3359689 | 32528.8 |
| sugar-specific transcriptional regulator, trmb family | HMPREF0220_3157 | Not Available | Negative | 3359676 - 3360428 | 28623.9 |
| thioredoxin | HMPREF0220_3158 | Not Available | Positive | 3360680 - 3360997 | 12021.8 |
| pyridine nucleotide-disulfide oxidoreductase | HMPREF0220_3159 | Not Available | Positive | 3361163 - 3362047 | 32370.1 |
| response regulator receiver domain protein | HMPREF0220_3160 | Not Available | Positive | 3362434 - 3363105 | 25148.1 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF0220_3161 | Not Available | Positive | 3363093 - 3364139 | 40314.6 |
| efflux abc transporter, permease protein | HMPREF0220_3162 | Not Available | Positive | 3364201 - 3365559 | 51832.6 |
| abc transporter, atp-binding protein | HMPREF0220_3163 | Not Available | Positive | 3365570 - 3366256 | 25652.1 |
| hypothetical protein | HMPREF0220_3164 | Not Available | Positive | 3366734 - 3367480 | 29397.4 |
| 4fe-4s binding domain protein | HMPREF0220_3165 | Not Available | Positive | 3367540 - 3368214 | 25277.3 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
