Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | HMPREF0220_2797 | Not Available | Positive | 2952572 - 2953525 | 34788.2 |
| php domain protein | HMPREF0220_2798 | Not Available | Positive | 2953529 - 2954242 | 26885.1 |
| hypothetical protein | HMPREF0220_2799 | Not Available | Positive | 2954273 - 2955130 | 32814.8 |
| hypothetical protein | HMPREF0220_2800 | Not Available | Positive | 2955130 - 2956248 | 41111.3 |
| hydrolase, nudix family | HMPREF0220_2801 | Not Available | Positive | 2956317 - 2956742 | 16424.7 |
| hypothetical protein | HMPREF0220_2802 | Not Available | Positive | 2956750 - 2957712 | 35888.7 |
| dna polymerase iii, alpha subunit | HMPREF0220_2803 | Not Available | Positive | 2957857 - 2961426 | 136185.0 |
| 6-phosphofructokinase | HMPREF0220_2804 | Not Available | Positive | 2961635 - 2962594 | 34236.7 |
| pyruvate kinase | HMPREF0220_2805 | Not Available | Positive | 2962646 - 2964406 | 63175.0 |
| 23s rrna (uracil-5-)-methyltransferase ruma | HMPREF0220_2806 | Not Available | Positive | 2964581 - 2965939 | 50889.9 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
