Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erfk/ybis/ycfs/ynhg | HMPREF0220_2745 | Not Available | Positive | 2886520 - 2888481 | 71973.5 |
| hypothetical protein | HMPREF0220_2746 | Not Available | Positive | 2888636 - 2889499 | 33373.2 |
| lysr substrate binding domain protein | HMPREF0220_2747 | Not Available | Negative | 2889707 - 2890588 | 33482.9 |
| ap endonuclease, family 2 | HMPREF0220_2748 | Not Available | Positive | 2891001 - 2891849 | 31663.8 |
| pyridine nucleotide-disulfide oxidoreductase | HMPREF0220_2749 | Not Available | Positive | 2891928 - 2893850 | 69019.0 |
| shikimate dehydrogenase | HMPREF0220_2750 | Not Available | Positive | 2893932 - 2894795 | 31632.1 |
| transporter, major facilitator family protein | HMPREF0220_2751 | Not Available | Positive | 2894997 - 2896214 | 43949.2 |
| hiran domain protein | HMPREF0220_2752 | Not Available | Positive | 2896450 - 2898315 | 73713.3 |
| amidohydrolase family protein | HMPREF0220_2753 | Not Available | Negative | 2898493 - 2899857 | 50626.3 |
| putative permease | HMPREF0220_2754 | Not Available | Negative | 2900035 - 2901378 | 46919.8 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
