Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinitrogenase iron-molybdenum cofactor | HMPREF0220_2694 | Not Available | Positive | 2840203 - 2840574 | 12968.5 |
| hypothetical protein | HMPREF0220_2695 | Not Available | Negative | 2840719 - 2841174 | 17548.8 |
| citrate transporter | HMPREF0220_2696 | Not Available | Negative | 2841213 - 2842478 | 45361.9 |
| amino acid carrier protein | HMPREF0220_2697 | Not Available | Positive | 2842947 - 2844398 | 52152.5 |
| hypothetical protein | HMPREF0220_2698 | Not Available | Negative | 2844608 - 2845036 | 17466.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF0220_2699 | Not Available | Negative | 2845438 - 2845899 | 16692.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HMPREF0220_2700 | Not Available | Negative | 2846005 - 2847231 | 46033.6 |
| riboflavin synthase, alpha subunit | HMPREF0220_2701 | Not Available | Negative | 2847221 - 2847886 | 24020.0 |
| riboflavin biosynthesis protein ribd | HMPREF0220_2702 | Not Available | Negative | 2847920 - 2849032 | 41365.1 |
| atp-dependent dna helicase recq | HMPREF0220_2703 | Not Available | Positive | 2849474 - 2851957 | 94850.0 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
