Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | HMPREF0220_2295 | Not Available | Positive | 2411192 - 2412097 | 34106.2 |
| riboflavin biosynthesis protein ribf | HMPREF0220_2296 | Not Available | Positive | 2412227 - 2413156 | 35247.5 |
| ribosomal protein s15 | HMPREF0220_2297 | Not Available | Positive | 2413260 - 2413517 | 9733.02 |
| edd domain protein, degv family | HMPREF0220_2298 | Not Available | Positive | 2413757 - 2414602 | 31432.2 |
| polyribonucleotide nucleotidyltransferase | HMPREF0220_2299 | Not Available | Positive | 2414727 - 2416838 | 77852.5 |
| hypothetical protein | HMPREF0220_2300 | Not Available | Negative | 2416843 - 2417004 | 6045.85 |
| polysaccharide deacetylase | HMPREF0220_2301 | Not Available | Positive | 2416961 - 2417704 | 28079.3 |
| peptidase m16 inactive domain protein | HMPREF0220_2302 | Not Available | Positive | 2417862 - 2419109 | 47252.7 |
| sporulation protein, ylmc/ymxh family | HMPREF0220_2303 | Not Available | Positive | 2419144 - 2419389 | 9096.23 |
| amino acid kinase family | HMPREF0220_2304 | Not Available | Positive | 2419399 - 2420622 | 44749.8 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
