Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain protein | HMPREF0220_1857 | Not Available | Negative | 1975132 - 1978569 | 131841.0 |
| diguanylate cyclase (ggdef) domain protein | HMPREF0220_1858 | Not Available | Negative | 1978602 - 1979954 | 51982.4 |
| prephenate dehydrogenase | HMPREF0220_1859 | Not Available | Negative | 1980350 - 1981189 | 31604.4 |
| shikimate kinase | HMPREF0220_1860 | Not Available | Negative | 1981210 - 1981743 | 20275.7 |
| shikimate dehydrogenase | HMPREF0220_1861 | Not Available | Negative | 1981755 - 1982564 | 29984.6 |
| prephenate dehydratase | HMPREF0220_1862 | Not Available | Negative | 1982604 - 1983800 | 46318.8 |
| chorismate synthase | HMPREF0220_1863 | Not Available | Negative | 1983803 - 1984882 | 39206.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF0220_1864 | Not Available | Negative | 1984860 - 1986173 | 48668.8 |
| 3-dehydroquinate synthase | HMPREF0220_1865 | Not Available | Negative | 1986173 - 1987237 | 40069.9 |
| 3-deoxy-7-phosphoheptulonate synthase | HMPREF0220_1866 | Not Available | Negative | 1987259 - 1988272 | 36731.7 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
