Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is605 orfb family | HMPREF0220_1527 | Not Available | Positive | 1659282 - 1660595 | 51016.9 |
| putative selenium-dependent hydroxylase accessory protein yqec | HMPREF0220_1528 | Not Available | Positive | 1660778 - 1661500 | 27195.1 |
| molybdenum hydroxylase accessory protein, ygfj family | HMPREF0220_1529 | Not Available | Positive | 1661609 - 1662187 | 22120.2 |
| molybdopterin binding domain protein | HMPREF0220_1530 | Not Available | Positive | 1662184 - 1663203 | 37172.7 |
| abc transporter, atp-binding protein | HMPREF0220_1531 | Not Available | Positive | 1663541 - 1665166 | 61815.9 |
| hypothetical protein | HMPREF0220_1532 | Not Available | Positive | 1665361 - 1665813 | 16831.9 |
| site-specific recombinase, phage integrase family | HMPREF0220_1533 | Not Available | Negative | 1666010 - 1667152 | 44380.3 |
| transcriptional regulator, blai/meci/copy family | HMPREF0220_1534 | Not Available | Positive | 1667463 - 1667840 | 14731.9 |
| hypothetical protein | HMPREF0220_1535 | Not Available | Negative | 1668259 - 1668531 | 10465.5 |
| hypothetical protein | HMPREF0220_1536 | Not Available | Positive | 1668839 - 1669414 | 21566.6 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
