Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | HMPREF0220_1447 | Not Available | Positive | 1562144 - 1562923 | 28925.6 |
| hypothetical protein | HMPREF0220_1448 | Not Available | Positive | 1562889 - 1563071 | 7223.78 |
| diguanylate cyclase (ggdef) domain protein | HMPREF0220_1449 | Not Available | Positive | 1563981 - 1565801 | 70963.2 |
| hypothetical protein | HMPREF0220_1450 | Not Available | Negative | 1565886 - 1566467 | 23547.6 |
| hypothetical protein | HMPREF0220_1451 | Not Available | Negative | 1566903 - 1567109 | 8299.48 |
| crispr-associated endoribonuclease cas6 | HMPREF0220_1452 | Not Available | Positive | 1567653 - 1568348 | 27280.2 |
| putative crispr-associated protein, csh1 family | HMPREF0220_1453 | Not Available | Positive | 1568339 - 1570099 | 69494.4 |
| hypothetical protein | HMPREF0220_1454 | Not Available | Positive | 1570086 - 1571081 | 38301.9 |
| crispr-associated protein cas5, hmari subtype | HMPREF0220_1455 | Not Available | Positive | 1571083 - 1571823 | 29136.9 |
| crispr-associated endonuclease cas3-hd | HMPREF0220_1456 | Not Available | Positive | 1571847 - 1574405 | 101288.0 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
