Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sporulation protein ytaf | HMPREF0220_1437 | Not Available | Negative | 1553875 - 1554498 | 22733.7 |
| dna-binding helix-turn-helix protein | HMPREF0220_1438 | Not Available | Positive | 1554686 - 1555330 | 24506.5 |
| ion channel | HMPREF0220_1439 | Not Available | Positive | 1555535 - 1556593 | 41349.9 |
| serine-type d-ala-d-ala carboxypeptidase | HMPREF0220_1440 | Not Available | Positive | 1556688 - 1557881 | 44489.4 |
| ribosomal protein s2 | HMPREF0220_1441 | Not Available | Positive | 1558088 - 1558801 | 26844.7 |
| translation elongation factor ts | HMPREF0220_1442 | Not Available | Positive | 1558880 - 1559791 | 33142.1 |
| ump kinase | HMPREF0220_1443 | Not Available | Positive | 1559875 - 1560579 | 25801.4 |
| ribosome recycling factor | HMPREF0220_1444 | Not Available | Positive | 1560605 - 1561162 | 21095.5 |
| hypothetical protein | HMPREF0220_1445 | Not Available | Positive | 1561165 - 1561368 | 7826.46 |
| di-trans,poly-cis-decaprenylcistransferase | HMPREF0220_1446 | Not Available | Positive | 1561397 - 1562131 | 27956.6 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
