Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase cas3 | HMPREF0220_1127 | Not Available | Positive | 1216938 - 1219346 | 94070.5 |
| ribosomal protein l11 methyltransferase | HMPREF0220_1128 | Not Available | Positive | 1219785 - 1220732 | 35101.0 |
| rna methyltransferase, rsme family | HMPREF0220_1129 | Not Available | Positive | 1220751 - 1221509 | 28873.9 |
| trna methylthiotransferase yqev | HMPREF0220_1130 | Not Available | Positive | 1221511 - 1222809 | 50060.5 |
| histidine triad domain protein | HMPREF0220_1131 | Not Available | Positive | 1222852 - 1223202 | 13061.7 |
| ribosomal protein s21 | HMPREF0220_1132 | Not Available | Positive | 1223365 - 1223544 | 7020.59 |
| yqey-like protein | HMPREF0220_1133 | Not Available | Positive | 1223565 - 1224017 | 17074.8 |
| tspo/mbr family protein | HMPREF0220_1134 | Not Available | Positive | 1224128 - 1224625 | 19275.6 |
| ribosomal subunit interface protein | HMPREF0220_1135 | Not Available | Positive | 1224818 - 1225375 | 21560.7 |
| putative sporulation protein yqfc | HMPREF0220_1136 | Not Available | Positive | 1225583 - 1225825 | 9129.21 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
