Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | NAP08 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1509986 bp
Thymine Count
1348598 bp
Guanine Count
666966 bp
Cytosine Count
496483 bp
Genome Length
4022033 bp
Protein-coding Genes
3741 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | HMPREF0220_0967 | Not Available | Positive | 1032661 - 1034064 | 50677.5 |
| mta/sah nucleosidase | HMPREF0220_0968 | Not Available | Positive | 1034438 - 1035136 | 25157.4 |
| tryptophan--trna ligase | HMPREF0220_0969 | Not Available | Positive | 1035159 - 1036160 | 37993.7 |
| hypothetical protein | HMPREF0220_0970 | Not Available | Positive | 1036267 - 1036434 | 6596.48 |
| c2 toxin, component ii | HMPREF0220_0971 | Not Available | Negative | 1036812 - 1039442 | 98695.2 |
| iota toxin component ia | HMPREF0220_0972 | Not Available | Negative | 1039495 - 1040886 | 53268.1 |
| lyttr dna-binding domain protein | HMPREF0220_0973 | Not Available | Negative | 1041276 - 1041695 | 16533.3 |
| hypothetical protein | HMPREF0220_0974 | Not Available | Negative | 1041699 - 1042022 | 12665.6 |
| lyts/yhck-type transmembrane receptor domain protein | HMPREF0220_0975 | Not Available | Positive | 1042903 - 1044105 | 44895.8 |
| putative protein mrke | HMPREF0220_0976 | Not Available | Positive | 1044110 - 1044880 | 30358.5 |
Pathways
423 pathways
Health Effects
No health effects information available for this bacterium.
