Edwardsiella tarda ATCC 23685

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Edwardsiella

Description

Edwardsiella tarda ATCC 23685 is a Gram-negative bacterium recognized for its relevance in both aquatic environments and as a potential pathogen in various hosts. This organism is part of the family Enterobacteriaceae and is characterized by its rod-shaped morphology. E. tarda is known to thrive in freshwater environments, indicating its adaptation to aquatic ecosystems. The biochemical properties of E. tarda include the ability to ferment certain carbohydrates, which may contribute to its metabolic versatility in diverse ecological niches. Additionally, its Gram-negative cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, is significant for its interactions with the environment and potential host organisms. E. tarda is often studied in the context of fish pathology, as it has been implicated in diseases affecting both freshwater and marine species. Understanding the traits of E. tarda, particularly its Gram-negative nature and metabolic capabilities, can provide insights into its ecological roles and interactions within aquatic ecosystems. The presence of E. tarda in freshwater habitats suggests that it may play a role in nutrient cycling and microbial community dynamics, emphasizing its importance in maintaining ecological balance in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusEdwardsiella
SpeciesEdwardsiella tarda
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edwardsiella tarda ATCC 23685

Accession NumberADGK00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3877 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Pyruvate formate-lyaseEDWATA_00359Not Available-336572 - 33900489986.1
glycyl-radical enzyme activating protein family proteinEDWATA_00360Not Available-339009 - 33998035869.4
Talc transaldolase-like proteinEDWATA_00361Not Available+340053 - 34071523063.1
AttlNot AvailableNot Available+340826 - 340838Not Available
Phage integrase family proteinEDWATA_00362Not Available-341044 - 34208139249.3
Repressor protein ciEDWATA_00363Not Available-342089 - 34267321174.5
RegulatorEDWATA_00364Not Available+342794 - 3430158174.3
CiiEDWATA_00365Not Available+343046 - 34355217977.8
Hypothetical proteinEDWATA_00366Not Available+343554 - 3437547476.05
Hypothetical proteinEDWATA_00367Not Available+343718 - 34405912647.2

Displaying genes 1 – 10 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm00013353-oxo-3-phenylpropanoateC9H7O3Chemical structure of 3-oxo-3-phenylpropanoateNot available
Average163.153Da
Monoisotopic163.0400677Da
BASm0001415beta-L-rhamnoseC6H12O5Chemical structure of beta-L-rhamnoseNot available
Average164.1565Da
Monoisotopic164.0684735Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da

Displaying 11–20 of 322 metabolites