Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ala d-ala ligase n-terminal domain protein | HMPREF7215_2503 | Not Available | Positive | 2324 - 3391 | 38535.2 |
| lysr substrate binding domain protein | HMPREF7215_2504 | Not Available | Negative | 3512 - 4363 | 31659.3 |
| abc transporter, substrate-binding protein, family 5 | HMPREF7215_2505 | Not Available | Positive | 4514 - 6058 | 56678.4 |
| hypothetical protein | HMPREF7215_0769 | Not Available | Negative | 6113 - 6254 | 5222.29 |
| aspartate carbamoyltransferase | HMPREF7215_0770 | Not Available | Negative | 6251 - 7183 | 33698.7 |
| glyoxalase family protein | HMPREF7215_0771 | Not Available | Positive | 7391 - 7756 | 13994.6 |
| hypothetical protein | HMPREF7215_0772 | Not Available | Negative | 7902 - 8438 | 19789.7 |
| hypothetical protein | HMPREF7215_2324 | Not Available | Positive | 9503 - 10846 | 49306.5 |
| abc transporter, permease protein | HMPREF7215_2325 | Not Available | Positive | 10945 - 12768 | 67025.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 11819 - 12109 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
