Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | HMPREF7215_1479 | Not Available | Positive | 518809 - 519912 | 37663.2 |
| prephenate dehydratase | HMPREF7215_1480 | Not Available | Positive | 519916 - 521055 | 42092.6 |
| putative shikimate dehydrogenase | HMPREF7215_1481 | Not Available | Positive | 521056 - 521757 | 25181.5 |
| allophanate hydrolase subunit 2 | HMPREF7215_1516 | Not Available | Positive | 521758 - 522567 | 28454.2 |
| lamb/ycsf family protein | HMPREF7215_1517 | Not Available | Positive | 522584 - 523354 | 26907.5 |
| indolepyruvate oxidoreductase subunit beta | HMPREF7215_1518 | Not Available | Negative | 523569 - 524162 | 20727.4 |
| indolepyruvate ferredoxin oxidoreductase, alpha subunit | HMPREF7215_1519 | Not Available | Negative | 524159 - 525949 | 65896.7 |
| lysr substrate binding domain protein | HMPREF7215_1520 | Not Available | Negative | 525981 - 526880 | 33672.1 |
| dicarboxylate carrier matc domain protein | HMPREF7215_1521 | Not Available | Negative | 526953 - 528230 | 44090.1 |
| hmgl-like protein | HMPREF7215_1522 | Not Available | Negative | 528247 - 529149 | 32850.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
