Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF7215_1905 | Not Available | Negative | 509209 - 509358 | 5688.89 |
| hypothetical protein | HMPREF7215_1906 | Not Available | Positive | 509792 - 510106 | 10908.9 |
| tobe domain protein | HMPREF7215_1907 | Not Available | Positive | 510311 - 510520 | 7434.17 |
| hypothetical protein | HMPREF7215_1661 | Not Available | Negative | 512961 - 513083 | 4315.37 |
| udp-n-acetylglucosamine 2-epimerase | HMPREF7215_1662 | Not Available | Positive | 513171 - 514265 | 39375.7 |
| hypothetical protein | HMPREF7215_1474 | Not Available | Negative | 514444 - 514617 | 6446.05 |
| 3-deoxy-7-phosphoheptulonate synthase | HMPREF7215_1475 | Not Available | Positive | 514618 - 515619 | 36164.8 |
| prephenate dehydrogenase | HMPREF7215_1476 | Not Available | Positive | 515616 - 516455 | 31224.3 |
| 3-dehydroquinate synthase | HMPREF7215_1477 | Not Available | Positive | 516456 - 517544 | 38663.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF7215_1478 | Not Available | Positive | 517541 - 518806 | 43342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
