Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, family 5 | HMPREF7215_1708 | Not Available | Negative | 350321 - 351892 | 58830.7 |
| abc transporter, atp-binding protein | HMPREF7215_1710 | Not Available | Negative | 351986 - 352954 | 36613.6 |
| abc transporter, atp-binding protein | HMPREF7215_1711 | Not Available | Negative | 352941 - 353918 | 35970.8 |
| abc transporter, permease protein | HMPREF7215_1712 | Not Available | Negative | 353925 - 354785 | 31071.8 |
| abc transporter, permease protein | HMPREF7215_1713 | Not Available | Negative | 354778 - 355695 | 32961.6 |
| lysr substrate binding domain protein | HMPREF7215_1714 | Not Available | Negative | 355934 - 356884 | 36121.4 |
| beta-eliminating lyase | HMPREF7215_1715 | Not Available | Positive | 357034 - 358071 | 37419.4 |
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | HMPREF7215_1717 | Not Available | Positive | 358096 - 359331 | 43695.9 |
| hypothetical protein | HMPREF7215_1716 | Not Available | Negative | 359328 - 359462 | 5320.6 |
| ycfa-like protein | HMPREF7215_1718 | Not Available | Positive | 359720 - 359890 | 6760.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
