Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobd | HMPREF7215_1312 | Not Available | Positive | 2419339 - 2420313 | 34555.2 |
| rna methyltransferase, trmh family, group 3 | HMPREF7215_0125 | Not Available | Positive | 2420330 - 2421140 | 28697.6 |
| pyrroline-5-carboxylate reductase | HMPREF7215_0126 | Not Available | Positive | 2421163 - 2421978 | 27615.7 |
| methionine-r-sulfoxide reductase | HMPREF7215_0127 | Not Available | Negative | 2422089 - 2423180 | 40758.6 |
| Trna-val | Not Available | Not Available | Positive | 2423357 - 2423431 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2423458 - 2423532 | Not Available |
| holo-[acyl-carrier-protein] synthase | HMPREF7215_0130 | Not Available | Positive | 2423692 - 2424066 | 13333.1 |
| yjef domain protein | HMPREF7215_0131 | Not Available | Positive | 2424066 - 2425559 | 51946.8 |
| hydrolase, p-loop family | HMPREF7215_0132 | Not Available | Positive | 2425553 - 2426047 | 18349.2 |
| universal bacterial protein yeaz | HMPREF7215_0133 | Not Available | Positive | 2426044 - 2426700 | 23342.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
