Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone protein clpb | HMPREF7215_0268 | Not Available | Negative | 2305107 - 2307716 | 96301.6 |
| aminopeptidase i zinc metalloprotease (m18) | HMPREF7215_0269 | Not Available | Positive | 2307923 - 2309239 | 47119.9 |
| divergent aaa domain protein | HMPREF7215_0270 | Not Available | Positive | 2309247 - 2310677 | 54220.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF7215_0271 | Not Available | Negative | 2310924 - 2312012 | 39517.7 |
| type i secretion outer membrane protein, tolc family | HMPREF7215_0272 | Not Available | Negative | 2312009 - 2313301 | 46874.1 |
| rnd transporter, hae1 family | HMPREF7215_0273 | Not Available | Negative | 2313303 - 2316407 | 112822.0 |
| hep/hag repeat protein | HMPREF7215_1983 | Not Available | Negative | 2316538 - 2321489 | 164114.0 |
| citrate lyase, alpha subunit | HMPREF7215_1984 | Not Available | Negative | 2321932 - 2323488 | 55724.9 |
| putative citrate (pro-3s)-lyase, beta subunit | HMPREF7215_1985 | Not Available | Negative | 2323490 - 2324401 | 32871.7 |
| citrate lyase acyl carrier protein | HMPREF7215_1986 | Not Available | Negative | 2324398 - 2324703 | 10758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
