Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l23 | HMPREF7215_0915 | Not Available | Negative | 1781061 - 1781357 | 11134.0 |
| 50s ribosomal protein l4 | HMPREF7215_0916 | Not Available | Negative | 1781354 - 1781977 | 22546.6 |
| 50s ribosomal protein l3 | HMPREF7215_0917 | Not Available | Negative | 1781998 - 1782624 | 22163.1 |
| ribosomal protein s10 | HMPREF7215_0918 | Not Available | Negative | 1782712 - 1783017 | 11358.0 |
| hypothetical protein | HMPREF7215_1486 | Not Available | Positive | 1783048 - 1783554 | 18704.5 |
| oxidoreductase, nitrogenase component 1 | HMPREF7215_1487 | Not Available | Positive | 1783551 - 1784720 | 41304.7 |
| periplasmic binding protein | HMPREF7215_1488 | Not Available | Positive | 1784727 - 1785818 | 39967.9 |
| periplasmic binding protein | HMPREF7215_1489 | Not Available | Positive | 1785860 - 1786942 | 39883.8 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF7215_1490 | Not Available | Positive | 1786942 - 1787949 | 35141.2 |
| abc transporter, atp-binding protein | HMPREF7215_1491 | Not Available | Positive | 1787946 - 1788740 | 28840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
