Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF7215_2697 | Not Available | Negative | 1688010 - 1688495 | 18041.0 |
| hdig domain protein | HMPREF7215_2698 | Not Available | Positive | 1688666 - 1689226 | 21081.1 |
| protein mraz | HMPREF7215_2700 | Not Available | Positive | 1690215 - 1690652 | 16128.5 |
| s-adenosyl-methyltransferase mraw | HMPREF7215_2701 | Not Available | Positive | 1690642 - 1691583 | 35216.5 |
| hypothetical protein | HMPREF7215_2702 | Not Available | Positive | 1691628 - 1691933 | 10810.2 |
| penicillin-binding protein, transpeptidase domain protein | HMPREF7215_2703 | Not Available | Positive | 1691977 - 1693671 | 62632.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HMPREF7215_2704 | Not Available | Positive | 1693687 - 1695186 | 54239.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | HMPREF7215_2705 | Not Available | Positive | 1695204 - 1696559 | 48693.6 |
| putative phospho-n-acetylmuramoyl-pentapeptide-transferase | HMPREF7215_2706 | Not Available | Positive | 1696556 - 1697524 | 34866.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | HMPREF7215_2707 | Not Available | Positive | 1697597 - 1698907 | 46939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
