Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, family 3 | HMPREF7215_2240 | Not Available | Positive | 1556059 - 1556883 | 30852.0 |
| abc transporter, permease protein | HMPREF7215_2241 | Not Available | Positive | 1556899 - 1557663 | 28565.2 |
| abc transporter, atp-binding protein | HMPREF7215_2242 | Not Available | Positive | 1557664 - 1558410 | 27499.6 |
| radical sam domain protein | HMPREF7215_2243 | Not Available | Positive | 1558420 - 1559430 | 37882.8 |
| hypothetical protein | HMPREF7215_2244 | Not Available | Positive | 1559406 - 1559630 | 8642.62 |
| sodium:neurotransmitter symporter family protein | HMPREF7215_2245 | Not Available | Positive | 1559746 - 1561098 | 49490.8 |
| hypothetical protein | HMPREF7215_2246 | Not Available | Positive | 1561118 - 1561234 | 4820.76 |
| hydrogenase expression/formation protein hype | HMPREF7215_2247 | Not Available | Negative | 1561293 - 1562288 | 34499.2 |
| hydrogenase expression/formation protein hypd | HMPREF7215_2248 | Not Available | Negative | 1562285 - 1563367 | 38060.6 |
| putative hydrogenase assembly chaperone hypc/hupf | HMPREF7215_2249 | Not Available | Negative | 1563345 - 1563590 | 8522.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
