Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF7215_1859 | Not Available | Positive | 1405965 - 1406939 | 34821.1 |
| hypothetical protein | HMPREF7215_1860 | Not Available | Positive | 1406976 - 1407413 | 16622.1 |
| membrane protein | HMPREF7215_1861 | Not Available | Positive | 1407494 - 1409014 | 53567.5 |
| trap transporter, 4tm/12tm fusion protein | HMPREF7215_1862 | Not Available | Positive | 1409138 - 1411015 | 66624.0 |
| lysr substrate binding domain protein | HMPREF7215_1863 | Not Available | Negative | 1411018 - 1411977 | 36176.3 |
| mmge/prpd family protein | HMPREF7215_1864 | Not Available | Positive | 1412068 - 1413459 | 51263.0 |
| 3-isopropylmalate dehydratase large subunit | HMPREF7215_1865 | Not Available | Positive | 1413477 - 1414748 | 46620.8 |
| 3-isopropylmalate dehydratase small subunit | HMPREF7215_1866 | Not Available | Positive | 1414772 - 1415278 | 18776.6 |
| mmge/prpd family protein | HMPREF7215_1867 | Not Available | Positive | 1415303 - 1416661 | 48925.1 |
| hypothetical protein | HMPREF7215_1868 | Not Available | Negative | 1416664 - 1416813 | 5747.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
