Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxygen-independent coproporphyrinogen iii oxidase | HMPREF7215_0043 | Not Available | Positive | 1295021 - 1296151 | 42419.8 |
| putative radical sam protein ygiq | HMPREF7215_0044 | Not Available | Positive | 1296165 - 1298060 | 71630.0 |
| udp-n-acetylmuramate dehydrogenase | HMPREF7215_0045 | Not Available | Positive | 1298029 - 1298979 | 34357.5 |
| selenium metabolism protein yedf | HMPREF7215_0046 | Not Available | Negative | 1299046 - 1299645 | 21271.7 |
| l-seryl-trna(sec) selenium transferase | HMPREF7215_0047 | Not Available | Positive | 1299799 - 1301184 | 50501.5 |
| selenocysteine-specific translation elongation factor | HMPREF7215_0048 | Not Available | Positive | 1301181 - 1303100 | 70307.5 |
| putative 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | HMPREF7215_0049 | Not Available | Positive | 1303196 - 1304032 | 30619.7 |
| putative pur operon repressor purr | HMPREF7215_0050 | Not Available | Positive | 1304064 - 1304852 | 28409.6 |
| putative ferredoxin | HMPREF7215_0051 | Not Available | Positive | 1304927 - 1305106 | 6199.54 |
| Trna-met | Not Available | Not Available | Positive | 1305139 - 1305213 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
