Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF7215_0619 | Not Available | Negative | 892487 - 892612 | 4881.15 |
| 30s ribosomal protein s1 | HMPREF7215_0620 | Not Available | Negative | 892645 - 894201 | 58266.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMPREF7215_0621 | Not Available | Negative | 894194 - 895075 | 31564.2 |
| trna dimethylallyltransferase | HMPREF7215_0622 | Not Available | Negative | 895072 - 896016 | 35636.8 |
| dna mismatch repair domain protein | HMPREF7215_0623 | Not Available | Negative | 896013 - 897842 | 65890.4 |
| dna mismatch repair protein muts | HMPREF7215_0624 | Not Available | Negative | 897839 - 900421 | 96784.0 |
| rnase h domain protein, yqgf family | HMPREF7215_0625 | Not Available | Negative | 900422 - 900844 | 15754.0 |
| alanine--trna ligase | HMPREF7215_0626 | Not Available | Negative | 900847 - 903495 | 96997.0 |
| amidohydrolase family protein | HMPREF7215_0627 | Not Available | Negative | 903561 - 904847 | 47322.9 |
| adenosylhomocysteinase | HMPREF7215_0628 | Not Available | Negative | 904849 - 906099 | 45401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
