Kingdom
Thermotogati
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Synergistota |
| Class | Synergistia |
| Order | Synergistales |
| Family | Dethiosulfovibrionaceae |
| Genus | Pyramidobacter |
| Species | Pyramidobacter piscolens |
| Strain | W5455 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514164 bp
Thymine Count
514721 bp
Guanine Count
766818 bp
Cytosine Count
766310 bp
Genome Length
2562014 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 877511 - 877587 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 877628 - 877704 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 877723 - 877812 | Not Available |
| exonuclease, dna polymerase iii, epsilon subunit family | HMPREF7215_0602 | Not Available | Negative | 877922 - 878977 | 39666.4 |
| putative butyryl-coa:acetate coa-transferase | HMPREF7215_0603 | Not Available | Negative | 879363 - 880700 | 48657.1 |
| indolepyruvate oxidoreductase subunit beta | HMPREF7215_0604 | Not Available | Negative | 880697 - 881290 | 21055.8 |
| indolepyruvate ferredoxin oxidoreductase, alpha subunit | HMPREF7215_0605 | Not Available | Negative | 881287 - 883236 | 71581.5 |
| lysr substrate binding domain protein | HMPREF7215_0606 | Not Available | Positive | 883226 - 884110 | 32741.5 |
| toxin-antitoxin system, toxin component, mazf family | HMPREF7215_0607 | Not Available | Negative | 884375 - 884704 | 12010.7 |
| spovt/abrb-like protein | HMPREF7215_0608 | Not Available | Negative | 884698 - 885009 | 11760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
