Serratia odorifera DSM 4582

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia odorifera DSM 4582 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. As a member of the genus Serratia, S. odorifera is significant due to its potential roles in ecological systems and its interactions with other microorganisms. The accession number ADBY00000000.1 provides a reference for further genomic studies, allowing researchers to explore its genetic makeup and functional capabilities. The flagellated nature of S. odorifera suggests that it may play an active role in its habitat, possibly influencing nutrient cycling or interacting with other microbial communities. Its Gram-negative classification indicates a complex cell wall structure, which may confer advantages in resisting certain environmental stresses or antibiotics, an important consideration in ecological and clinical microbiology. Overall, the traits of Serratia odorifera DSM 4582 underscore its potential importance in microbial ecology, where flagellated motility and a simplified genomic architecture may facilitate its survival and interaction within diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia odorifera
StrainDSM 4582

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia odorifera DSM 4582
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia odorifera DSM 4582 contig00122, whole genome shotgun

Gene Summary

Adenine Count

1121516 bp

Thymine Count

1129515 bp

Guanine Count

1434199 bp

Cytosine Count

1440448 bp

Genome Length

5125678 bp

Protein-coding Genes

4910 genes

Non-Coding Genes

338 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseHMPREF0758_0652Not AvailableNegative651908 - 65270228353.2
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseHMPREF0758_0653Not AvailableNegative652729 - 65353229620.4
5-carboxymethyl-2-hydroxymuconate delta isomeraseHMPREF0758_0654Not AvailableNegative653547 - 65393314623.5
3,4-dihydroxyphenylacetate 2,3-dioxygenaseHMPREF0758_0655Not AvailableNegative653942 - 65479932103.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseHMPREF0758_0656Not AvailableNegative654892 - 65634652894.5
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, c-terminal subunitHMPREF0758_0657Not AvailableNegative656343 - 65710728679.2
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, n-terminal subunitHMPREF0758_0658Not AvailableNegative657104 - 65777223856.7
homoprotocatechuate degradation operon regulator, hparHMPREF0758_0659Not AvailablePositive658034 - 65848917299.1
hydrolase, alpha/beta domain proteinHMPREF0758_0660Not AvailablePositive658625 - 65944930388.4
alcohol dehydrogenase, iron-dependentHMPREF0758_0661Not AvailablePositive659594 - 66072140616.9

Displaying genes 921 – 930 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.