Serratia odorifera DSM 4582

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia odorifera DSM 4582 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. As a member of the genus Serratia, S. odorifera is significant due to its potential roles in ecological systems and its interactions with other microorganisms. The accession number ADBY00000000.1 provides a reference for further genomic studies, allowing researchers to explore its genetic makeup and functional capabilities. The flagellated nature of S. odorifera suggests that it may play an active role in its habitat, possibly influencing nutrient cycling or interacting with other microbial communities. Its Gram-negative classification indicates a complex cell wall structure, which may confer advantages in resisting certain environmental stresses or antibiotics, an important consideration in ecological and clinical microbiology. Overall, the traits of Serratia odorifera DSM 4582 underscore its potential importance in microbial ecology, where flagellated motility and a simplified genomic architecture may facilitate its survival and interaction within diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia odorifera
StrainDSM 4582

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia odorifera DSM 4582
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia odorifera DSM 4582 contig00122, whole genome shotgun

Gene Summary

Adenine Count

1121516 bp

Thymine Count

1129515 bp

Guanine Count

1434199 bp

Cytosine Count

1440448 bp

Genome Length

5125678 bp

Protein-coding Genes

4910 genes

Non-Coding Genes

338 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coenzyme pqq biosynthesis protein bHMPREF0758_3731Not AvailableNegative3762041 - 376295233022.5
renal dipeptidase family proteinHMPREF0758_3732Not AvailableNegative3763285 - 376433437381.5
membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate familyHMPREF0758_3733Not AvailableNegative3764405 - 376690991129.2
hypothetical proteinHMPREF0758_3734Not AvailablePositive3767320 - 376777216706.9
hypothetical proteinHMPREF0758_3735Not AvailablePositive3767769 - 376907047071.3
mandelate racemase/muconate lactonizing enzyme, c-terminal domain proteinHMPREF0758_3736Not AvailablePositive3769387 - 377059244099.5
abc transporter, substrate-binding protein, family 5HMPREF0758_3737Not AvailablePositive3770626 - 377225760137.5
abc transporter, permease proteinHMPREF0758_3738Not AvailablePositive3772254 - 377329137380.7
abc transporter, permease proteinHMPREF0758_3739Not AvailablePositive3773288 - 377419332618.7
abc transporter, atp-binding proteinHMPREF0758_3740Not AvailablePositive3774165 - 377502832008.2

Displaying genes 3971 – 3980 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.