Serratia odorifera DSM 4582

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia odorifera DSM 4582 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. As a member of the genus Serratia, S. odorifera is significant due to its potential roles in ecological systems and its interactions with other microorganisms. The accession number ADBY00000000.1 provides a reference for further genomic studies, allowing researchers to explore its genetic makeup and functional capabilities. The flagellated nature of S. odorifera suggests that it may play an active role in its habitat, possibly influencing nutrient cycling or interacting with other microbial communities. Its Gram-negative classification indicates a complex cell wall structure, which may confer advantages in resisting certain environmental stresses or antibiotics, an important consideration in ecological and clinical microbiology. Overall, the traits of Serratia odorifera DSM 4582 underscore its potential importance in microbial ecology, where flagellated motility and a simplified genomic architecture may facilitate its survival and interaction within diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia odorifera
StrainDSM 4582

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia odorifera DSM 4582
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia odorifera DSM 4582 contig00122, whole genome shotgun

Gene Summary

Adenine Count

1121516 bp

Thymine Count

1129515 bp

Guanine Count

1434199 bp

Cytosine Count

1440448 bp

Genome Length

5125678 bp

Protein-coding Genes

4910 genes

Non-Coding Genes

338 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF0758_3334Not AvailablePositive3372511 - 33727508816.03
phosphoribosylglycinamide formyltransferase 2HMPREF0758_3335Not AvailableNegative3372824 - 337395740563.8
cold-shock dna-binding domain proteinHMPREF0758_3336Not AvailablePositive3374272 - 33744817416.73
dead/deah box helicaseHMPREF0758_3337Not AvailablePositive3374677 - 337601448394.7
yebg proteinHMPREF0758_3338Not AvailablePositive3376101 - 337642411775.9
asch domain proteinHMPREF0758_3339Not AvailablePositive3376464 - 337677211688.2
yebf family proteinHMPREF0758_3340Not AvailablePositive3376842 - 337720112872.4
hypothetical proteinHMPREF0758_3341Not AvailablePositive3377416 - 337806923659.4
peptidase, s9a/b/c family, catalytic domain proteinHMPREF0758_3342Not AvailablePositive3378140 - 338017378165.4
exodeoxyribonuclease 10HMPREF0758_3343Not AvailableNegative3380207 - 338087525002.4

Displaying genes 3571 – 3580 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.