Serratia odorifera DSM 4582

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia odorifera DSM 4582 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. As a member of the genus Serratia, S. odorifera is significant due to its potential roles in ecological systems and its interactions with other microorganisms. The accession number ADBY00000000.1 provides a reference for further genomic studies, allowing researchers to explore its genetic makeup and functional capabilities. The flagellated nature of S. odorifera suggests that it may play an active role in its habitat, possibly influencing nutrient cycling or interacting with other microbial communities. Its Gram-negative classification indicates a complex cell wall structure, which may confer advantages in resisting certain environmental stresses or antibiotics, an important consideration in ecological and clinical microbiology. Overall, the traits of Serratia odorifera DSM 4582 underscore its potential importance in microbial ecology, where flagellated motility and a simplified genomic architecture may facilitate its survival and interaction within diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia odorifera
StrainDSM 4582

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia odorifera DSM 4582
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia odorifera DSM 4582 contig00122, whole genome shotgun

Gene Summary

Adenine Count

1121516 bp

Thymine Count

1129515 bp

Guanine Count

1434199 bp

Cytosine Count

1440448 bp

Genome Length

5125678 bp

Protein-coding Genes

4910 genes

Non-Coding Genes

338 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[isocitrate dehydrogenase (nadp(+))] kinaseHMPREF0758_1684Not AvailablePositive1707897 - 170965167730.5
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolaseHMPREF0758_1685Not AvailableNegative1709682 - 171032321896.7
phosphogluconate dehydrataseHMPREF0758_1686Not AvailableNegative1710403 - 171221764341.7
shikimate kinaseHMPREF0758_1687Not AvailableNegative1712359 - 171289819560.4
transcriptional regulator, iclr family, c-terminal domain proteinHMPREF0758_1688Not AvailableNegative1713149 - 171397929708.9
5-methyltetrahydrofolate--homocysteine methyltransferaseHMPREF0758_1689Not AvailablePositive1714290 - 1717970135636.0
na/pi-cotransporter ii-like proteinHMPREF0758_1690Not AvailablePositive1718235 - 171988459684.4
aspartate kinase, monofunctional classHMPREF0758_1691Not AvailableNegative1720973 - 172234049137.0
trka n-terminal domain proteinHMPREF0758_1692Not AvailableNegative1722704 - 172451266070.8
glucose-6-phosphate isomeraseHMPREF0758_1693Not AvailablePositive1724757 - 172640361118.4

Displaying genes 1921 – 1930 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.