Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23/m37 peptidase/aminotransferase class iii | VDA_002009 | Not Available | Negative | 1160804 - 1161469 | 24891.3 |
| major facilitator superfamily (mfs_1) transporter | VDA_002010 | Not Available | Negative | 1161459 - 1162700 | 44857.2 |
| hypothetical protein | VDA_002011 | Not Available | Negative | 1163498 - 1164808 | 47927.8 |
| hypothetical protein | VDA_002012 | Not Available | Negative | 1164805 - 1166343 | 58201.4 |
| hypothetical glycine betaine transporter | VDA_002013 | Not Available | Positive | 1166831 - 1168384 | 55018.1 |
| putative membrane protein | VDA_002014 | Not Available | Negative | 1168498 - 1169730 | 46356.1 |
| hypothetical protein | VDA_002015 | Not Available | Negative | 1170525 - 1170644 | 4605.5 |
| hypothetical protein | VDA_002016 | Not Available | Positive | 1171109 - 1171399 | 10998.0 |
| putative cytoplasmic protein | VDA_002017 | Not Available | Positive | 1171544 - 1172266 | 27836.4 |
| putative rok family protein | VDA_002018 | Not Available | Positive | 1172395 - 1173306 | 32606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


