Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001979 | Not Available | Negative | 1103240 - 1104784 | 57565.7 |
| hypothetical amidase | VDA_001980 | Not Available | Positive | 1105540 - 1107306 | 66457.5 |
| membrane protein terc | VDA_001981 | Not Available | Negative | 1107426 - 1108400 | 36394.4 |
| arginine/ornithine antiporter arcd | VDA_001982 | Not Available | Negative | 1109652 - 1111058 | 50288.0 |
| putative nadh-dependent flavin oxidoreductase | VDA_001983 | Not Available | Positive | 1114054 - 1115157 | 41463.4 |
| hypothetical protein | VDA_001984 | Not Available | Positive | 1115439 - 1115738 | 11782.2 |
| putative efflux (pet) family transporter | VDA_001985 | Not Available | Negative | 1115905 - 1117992 | 78692.2 |
| hypothetical membrane protein | VDA_001986 | Not Available | Positive | 1118273 - 1119877 | 60540.4 |
| hypothetical toxr-regulated lipoprotein | VDA_001987 | Not Available | Positive | 1120199 - 1123039 | 104386.0 |
| abc transporter atp-binding protein | VDA_001988 | Not Available | Negative | 1123707 - 1124552 | 30587.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


