Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fucose 4-o-acetylase | VDA_001969 | Not Available | Negative | 1091916 - 1092941 | 39075.1 |
| hypothetical transcriptional | VDA_001970 | Not Available | Negative | 1093068 - 1093994 | 36104.6 |
| hypothetical protein | VDA_001971 | Not Available | Negative | 1094026 - 1095390 | 53481.2 |
| hypothetical protein | VDA_001972 | Not Available | Positive | 1095865 - 1096611 | 27740.6 |
| putative nupc nucleoside permease | VDA_001973 | Not Available | Positive | 1096949 - 1098157 | 42072.3 |
| molybdopterin biosynthesis protein b | VDA_001974 | Not Available | Negative | 1098336 - 1099094 | 27567.6 |
| molybdopterin biosynthesis protein a | VDA_001975 | Not Available | Negative | 1099107 - 1100315 | 43321.8 |
| gtp cyclohydrolase i type 1 | VDA_001976 | Not Available | Positive | 1100637 - 1101290 | 24454.7 |
| lysr-family transcriptional regulator | VDA_001977 | Not Available | Positive | 1101397 - 1102317 | 35063.4 |
| radical activating enzyme | VDA_001978 | Not Available | Negative | 1102333 - 1103217 | 33406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


